| Reference | Literature Topic | Species | Genes Addressed |
|---|
Arribas V, et al. (2024) Unravelling the Role of Candida albicans Prn1 in the Oxidative Stress Response through a Proteomics Approach. Antioxidants (Basel) 13(5)
  | Large-scale protein detection | C. albicans | |C1_00700W_A |CR_09140C_A |CUB1 |MNL1 |NRG1 |PRN1 |QCR9 |
Avelar GM, et al. (2024) A CO(2) sensing module modulates beta-1,3-glucan exposure in Candida albicans. MBio :e0189823
  | Genomic expression study | C. albicans | |NCE103 |PHO84 |RCA1 |SCH9 |XOG1 |
Bergin S, et al. (2024) Analysis of clinical Candida parapsilosis isolates reveals copy number variation in key fluconazole resistance genes. Antimicrob Agents Chemother :e0161923
| Genomic expression study | C. parapsilosis | |CDR1 |CDR1B |ERG11 |MDR1 |MDR1B |MRR1 |
Bregon-Villahoz M, et al. (2024) Candida albicans cDNA library screening reveals novel potential diagnostic targets for invasive candidiasis. Diagn Microbiol Infect Dis 109(3):116311
| Other large-scale proteomic analysis | C. albicans | |APE2 |CYS3 |ENO1 |HYR1 |SEC21 |
Chow EWL, et al. (2024) Genome-wide profiling of piggyBac transposon insertion mutants reveals loss of the F(1) F(0) ATPase complex causes fluconazole resistance in Candida glabrata. Mol Microbiol
| Genomic expression study, Large-scale phenotype analysis | C. glabrata | |ATP22 |ATP3 |CDR1 |PDH1 |PDR1 |SNQ2 |
Dunaiski CM, et al. (2024) Molecular epidemiology and antimicrobial resistance of vaginal Candida glabrata isolates in Namibia. Med Mycol
| Other genomic analysis | C. glabrata | |CDR1 |ERG6 |ERG7 |FKS1 |FKS2 |FPS1 |MSH2 |PDR1 |SNQ2 |
Fayed B, et al. (2024) Transcriptome Analysis of Human Dermal Cells Infected with Candida auris Identified Unique Pathogenesis/Defensive Mechanisms Particularly Ferroptosis. Mycopathologia 189(4):65
| Genomic expression study | C. auris | |KRE6 |MDR1 |
Gavandi T, et al. (2024) MIG1, TUP1 and NRG1 mediated yeast to hyphal morphogenesis inhibition in Candida albicans by ganciclovir. Braz J Microbiol
| Genomic expression study | C. albicans | |MIG1 |NRG1 |TUP1 |
Hefny ZA, et al. (2024) Transcriptomic meta-analysis to identify potential antifungal targets in Candida albicans. BMC Microbiol 24(1):66
| Genomic expression study | C. albicans | |C3_06710W_A |C4_01950W_A |C7_03400C_A |GLC7 |PRA1 |RIM101 |RIM21 |RSP5 |SAP4 |SAP6 |SOD1 |SOD2 |SOD3 |SOD4 |MORE |
Jaeger M, et al. (2024) Alpha1-antitrypsin impacts innate host-pathogen interactions with Candida albicans by stimulating fungal filamentation. Virulence :2333367
| Genomic expression study | C. albicans | |C2_05670C_A |CPH1 |CR_06090W_A |CR_07910C_A |ECE1 |EFG1 |HOC1 |MKC1 |OCH1 |SET3 |TCC1 |TUP1 |
Kim M-J, et al. (2024) A Brg1-Rme1 circuit in Candida albicans hyphal gene regulation. MBio :e0187224
| Genomic expression study | C. albicans | |BRG1 |RME1 |
Kramara J, et al. (2024) Systematic analysis of the Candida albicans kinome reveals environmentally contingent protein kinase-mediated regulation of filamentation and biofilm formation in vitro and in vivo. mBio :e0124924
| Large-scale phenotype analysis | C. albicans | |ATG1 |BCK1 |BUD32 |CBK1 |CKA2 |CKB1 |CKB2 |CLA4 |CR_06040W_A |FRK1 |GCN2 |GIN4 |HOG1 |IRE1 |MORE |
Kumar K, et al. (2024) SWI/SNF complex-mediated chromatin remodeling in Candida glabrata promotes immune evasion. iScience 27(4):109607
| Other genomic analysis, Genomic expression study | C. glabrata | |BMT2 |CHD1 |EPA1 |INO80 |ISW1 |ISW2 |SNF2 |STH1 |SWR1 |
Lash E, et al. (2024) The spliceosome impacts morphogenesis in the human fungal pathogen Candida albicans. MBio :e0153524
| Genomic expression study | C. albicans | |BRR2 |BUD31 |CEF1 |CWC25 |EXM2 |GCR3 |HSH49 |HUB1 |LSM4 |LSM5 |LSM6 |LSM7 |MSL5 |MUD2 |MORE |
Luo G, et al. (2024) A human commensal-pathogenic fungus suppresses host immunity via targeting TBK1. Cell Host Microbe
| Genomic expression study | C. albicans | |CMI1 |
Misas E, et al. (2024) Genomic description of acquired fluconazole- and echinocandin-resistance in patients with serial Candida glabrata isolates. J Clin Microbiol :e0114023
| Other genomic analysis | C. glabrata | |FKS1 |FKS2 |PDR1 |
Nickels TJ, et al. (2024) Tn-seq of the Candida glabrata reference strain CBS138 reveals epigenetic plasticity, structural variation, and intrinsic mechanisms of resistance to micafungin. G3 (Bethesda)
| Other genomic analysis | C. glabrata | |CDR1 |FKS2 |PDR1 |
O'Connor-Moneley J, et al. (2024) Deletion of the Candida albicans TLO gene family results in alterations in membrane sterol composition and fluconazole tolerance. PLoS ONE 19(8):e0308665
| Genomic expression study | C. albicans | |AOX2 |CTA2 |CTA24 |CTA26 |ERG2 |ERG25 |ERG251 |ERG3 |ERG6 |TLO1 |TLO11 |UPC2 |
Pavesic MW, et al. (2024) Calcineurin-dependent contributions to fitness in the opportunistic pathogen Candida glabrata. mSphere 9(1):e0055423
| Large-scale phenotype analysis | C. glabrata | |ALG5 |ALG6 |ALG8 |APL2 |APS1 |ARF1 |CNB1 |CRZ1 |DCW1 |FKS1 |FLC2 |INP53 |LAS21 |PDR1 |MORE |
Rai LS, et al. (2024) Metabolic reprogramming during Candida albicans planktonic-biofilm transition is modulated by the transcription factors Zcf15 and Zcf26. PLoS Biol 22(6):e3002693
| Other genomic analysis, Genomic expression study | C. albicans | |C4_02190C_A |ECE1 |HWP1 |HYR1 |INO1 |ZCF15 |ZCF26 |
Raj K, et al. (2024) Decoding the role of oxidative stress resistance and alternative carbon substrate assimilation in the mature biofilm growth mode of Candida glabrata. BMC Microbiol 24(1):128
| Genomic expression study | C. glabrata | |COF1 |ERG11 |ERG9 |ICL1 |MLS1 |NTH1 |PCK1 |PEP1 |TEF3 |
Sprague JL, et al. (2024) Candida albicans translocation through the intestinal epithelial barrier is promoted by fungal zinc acquisition and limited by NFkappaB-mediated barrier protection. PLoS Pathog 20(3):e1012031
| Genomic expression study | C. albicans | |ECE1 |PRA1 |ZRC1 |ZRT101 |ZRT2 |ZRT3 |
Teng W, et al. (2024) Heat Shock Protein SSA1 Enriched in Hypoxic Secretome of Candida albicans Exerts an Immunomodulatory Effect via Regulating Macrophage Function. Cells 13(2)
| Large-scale protein detection | C. albicans | |HSP70 |
Tian S, et al. (2024) Genetic microevolution of clinical Candida auris with reduced Amphotericin B sensitivity in China. Emerg Microbes Infect :2398596
| Genomic expression study | C. auris | |B9J08_001015 |B9J08_001366 |B9J08_004797 |
Vande Zande P, et al. (2024) Step-wise evolution of azole resistance through copy number variation followed by KSR1 loss of heterozygosity in Candida albicans. PLoS Pathog 20(8):e1012497
| Genomic expression study | C. albicans | |KSR1 |
Wakade RS, et al. (2024) Temporal dynamics of Candida albicans morphogenesis and gene expression reveals distinctions between in vitro and in vivo filamentation. mSphere :e0011024
| Genomic expression study | C. albicans | |BRG1 |CPH1 |CPH2 |ECE1 |EFG1 |HYR1 |IHD1 |NRG1 |PES1 |TEC1 |UME6 |YWP1 |
Wang Y and Xu J (2024) Associations between Genomic Variants and Antifungal Susceptibilities in the Archived Global Candida auris Population. J Fungi (Basel) 10(1)
| Other genomic analysis | C. auris | |ERG11 |FKS1 |
Xiong EH, et al. (2024) Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions. Cell Rep 43(8):114601
| Large-scale phenotype analysis | C. albicans | |C1_08150C_A |C2_02660W_A |C2_03890W_A |C3_04690C_A |IML3 |RFA3 |
Xiong L, et al. (2024) Regulatory features of Candida albicans hemin-induced filamentation. G3 (Bethesda)
| Genomic expression study | C. albicans | |BRG1 |CFL4 |CSA2 |EFG1 |FRE10 |FTR1 |HMX1 |PGA10 |PGA7 |RBT5 |RIM101 |YWP1 |ZCF20 |
Xiong L, et al. (2024) Strain variation in the Candida albicans iron limitation response. mSphere :e0037224
| Genomic expression study | C. albicans | |CRH11 |HAC1 |HWP2 |PGA13 |PHR1 |RCA1 |SEF1 |
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